ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: homeobox A10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000253293 HOXA10 9606 - 7:27170591-27180261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000283921 HOXA10-001 27170591-27174306 protein_coding
  ENST00000396344 HOXA10-003 27171220-27180261 protein_coding
  ENST00000519593 HOXA10-006 27171777-27172889 processed_transcript
  ENST00000521421 HOXA10-005 27171463-27172889 processed_transcript
  ENST00000524368 HOXA10-004 27171378-27172963 processed_transcript
  ENST00000613671 HOXA10-201 27170592-27174255 protein_coding

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000283921ENST00000396344ENST00000524368ENST00000613671
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000283921 N/A 0.320±0.28 0.050±0.00 2.605±0.00 4.704±0.76
ENST00000396344 N/A N/A N/A N/A 7.582±3.65
ENST00000524368 N/A 0.583±0.31 N/A N/A 4.777±0.73
ENST00000613671 1.550±0.00 0.302±0.05 N/A 4.568±0.00 9.106±2.95

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007OD CIL_0007OD_0002 UCNEbase
CIL_0008QL CIL_0008QL_0001 VISTA
CIL_000911 CIL_000911_0001 VISTA
CIL_000811 CIL_000811_0001 VISTA
CIL_00097P CIL_00097P_0001 VISTA
CIL_0003PA CIL_0003PA_0001 CGP
CIL_0006I0 CIL_0006I0_0002 CGP
CIL_0003P7 CIL_0003P7_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001501 IEA skeletal system development
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007275 TAS multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007338 IEA single fertilization
GO:0008584 IEA male gonad development
GO:0009952 IEA anterior/posterior pattern specification
GO:0009954 IEA proximal/distal pattern formation
GO:0010468 IEA regulation of gene expression
GO:0030326 IEA embryonic limb morphogenesis
GO:0042826 IPI histone deacetylase binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060065 IEA uterus development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031337 hoxa10b protein_coding Danio_rerio
ENSMUSG00000000938 Hoxa10 protein_coding Mus_musculus

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