ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: homeobox A10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000283921 HOXA10-001 ENSG00000253293 9606 - 7:27170591-27174306 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000283921
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000283921 0.320±0.28 0.050±0.00 2.605±0.00 4.704±0.76

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001501 IEA skeletal system development
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007275 TAS multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007338 IEA single fertilization
GO:0008584 IEA male gonad development
GO:0009952 IEA anterior/posterior pattern specification
GO:0009954 IEA proximal/distal pattern formation
GO:0010468 IEA regulation of gene expression
GO:0030326 IEA embryonic limb morphogenesis
GO:0042826 IPI histone deacetylase binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060065 IEA uterus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125581 Hoxa10-001 protein_coding Mus_musculus 0 2608
ENSMUST00000126402 Hoxa10-002 processed_transcript Mus_musculus 0 1637
ENSMUST00000121043 Hoxa10-004 protein_coding Mus_musculus 0 926
ENSMUST00000142611 Hoxa10-003 processed_transcript Mus_musculus 0 771
ENSMUST00000174042 Hoxb9-002 protein_coding Mus_musculus 3e-27 128
ENSMUST00000000010 Hoxb9-001 protein_coding Mus_musculus 3e-27 128
ENSDART00000104612 hmx3a-001 protein_coding Danio_rerio 0.000001 60

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