ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005609 Ctr9 10090 + 7:111028951-111056377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005749 Ctr9-001 111028951-111056377 protein_coding
  ENSMUST00000123681 Ctr9-008 111050993-111052370 processed_transcript
  ENSMUST00000140220 Ctr9-006 111034036-111035392 retained_intron
  ENSMUST00000143818 Ctr9-005 111030215-111034056 processed_transcript
  ENSMUST00000146558 Ctr9-007 111046310-111046822 retained_intron
  ENSMUST00000146709 Ctr9-004 111029013-111030809 retained_intron
  ENSMUST00000152019 Ctr9-002 111028995-111047647 retained_intron
  ENSMUST00000157025 Ctr9-003 111046310-111047979 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000005749
Transcript ID C166 Tie2+ EC mES
ENSMUST00000005749 10.589±0.53 5.273±1.99 8.874±0.80

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004JB CIL_0004JB_0002 CGP
CIL_000417 CIL_000417_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001711 IMP endodermal cell fate commitment
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007259 IMP JAK-STAT cascade
GO:0010390 IEA histone monoubiquitination
GO:0016055 IEA Wnt signaling pathway
GO:0016593 ISS Cdc73/Paf1 complex
GO:0019827 IMP stem cell maintenance
GO:0032968 ISS positive regulation of transcription elongation from RNA polymerase II promoter
GO:0033523 IEA histone H2B ubiquitination
GO:0035327 IDA transcriptionally active chromatin
GO:0042169 IDA SH2 domain binding
GO:0045638 ISS negative regulation of myeloid cell differentiation
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051571 ISS positive regulation of histone H3-K4 methylation
GO:0070102 IMP interleukin-6-mediated signaling pathway
GO:0071222 IDA cellular response to lipopolysaccharide
GO:0080182 ISS histone H3-K4 trimethylation
GO:2001162 ISS positive regulation of histone H3-K79 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009170 ctr9 protein_coding Danio_rerio
ENSG00000198730 CTR9 CTR9, Paf1/RNA polymerase II complex component protein_coding Homo_sapiens

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