ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006058 Snf8 10090 + 11:96034885-96047430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006217 Snf8-001 96034885-96047430 protein_coding
  ENSMUST00000107700 Snf8-005 96034965-96047430 protein_coding
  ENSMUST00000145749 Snf8-002 96044690-96047430 processed_transcript
  ENSMUST00000150946 Snf8-003 96034951-96039878 processed_transcript
  ENSMUST00000156394 Snf8-006 96044824-96047319 processed_transcript
  ENSMUST00000156524 Snf8-004 96034956-96043661 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000006217ENSMUST00000107700ENSMUST00000145749ENSMUST00000150946
Transcript ID C166 Tie2+ EC mES
ENSMUST00000006217 27.175±2.07 20.753±8.80 8.270±0.93
ENSMUST00000107700 10.423±1.26 4.684±0.41 3.221±0.00
ENSMUST00000145749 N/A 1.719±0.15 0.643±0.03
ENSMUST00000150946 N/A N/A 10.760±2.50

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007ZM CIL_0007ZM_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005768 IEA endosome
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008134 IEA transcription factor binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0042803 IEA protein homodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058076 snf8 protein_coding Danio_rerio
ENSG00000159210 SNF8 SNF8, ESCRT-II complex subunit protein_coding Homo_sapiens

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