ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006217 Snf8-001 ENSMUSG00000006058 10090 + 11:96034885-96047430 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000006217
Transcript ID C166 Tie2+ EC mES
ENSMUST00000006217 27.175±2.07 20.753±8.80 8.270±0.93

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005768 IEA endosome
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008134 IEA transcription factor binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0042803 IEA protein homodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290330 SNF8-002 protein_coding Homo_sapiens 0 1129
ENST00000502492 SNF8-001 protein_coding Homo_sapiens 0 1168
ENST00000504000 SNF8-003 retained_intron Homo_sapiens 0 307
ENST00000507302 SNF8-007 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000509989 SNF8-011 nonsense_mediated_decay Homo_sapiens 0 571
ENST00000509995 SNF8-008 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000510195 SNF8-005 retained_intron Homo_sapiens 0 564
ENST00000510558 SNF8-006 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000512243 SNF8-009 retained_intron Homo_sapiens 0 549
ENST00000514089 SNF8-015 processed_transcript Homo_sapiens 0 488
ENST00000514929 SNF8-004 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000515572 SNF8-012 retained_intron Homo_sapiens 0 488
ENST00000573795 SNF8-017 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000576353 SNF8-016 nonsense_mediated_decay Homo_sapiens 0 651

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