ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020893 Per1 10090 + 11:69095217-69109960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021271 Per1-001 69098948-69109960 protein_coding
  ENSMUST00000101004 Per1-003 69095217-69106458 protein_coding
  ENSMUST00000102605 Per1-002 69100522-69109960 protein_coding
  ENSMUST00000132462 Per1-005 69100152-69101048 protein_coding
  ENSMUST00000142392 Per1-004 69100509-69106296 nonsense_mediated_decay
  ENSMUST00000166748 Per1-201 69100158-69109948 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000021271ENSMUST00000101004ENSMUST00000166748
Transcript ID C166 Tie2+ EC mES
ENSMUST00000021271 2.037±0.44 29.857±20.62 1.751±0.17
ENSMUST00000101004 N/A 5.776±5.01 0.753±0.00
ENSMUST00000166748 1.274±0.35 1.203±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000976 IDA transcription regulatory region sequence-specific DNA binding
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000989 IDA transcription factor binding transcription factor activity
GO:0002028 IMP regulation of sodium ion transport
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0007623 TAS circadian rhythm
GO:0008134 IPI transcription factor binding
GO:0009416 IEP response to light stimulus
GO:0010608 IMP posttranscriptional regulation of gene expression
GO:0019900 IPI kinase binding
GO:0031490 IDA chromatin DNA binding
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032922 ISS circadian regulation of gene expression
GO:0042634 ISS regulation of hair cycle
GO:0042752 IMP regulation of circadian rhythm
GO:0043124 ISS negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0043966 IDA histone H3 acetylation
GO:0043967 IEA histone H4 acetylation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046329 ISS negative regulation of JNK cascade
GO:0051591 IDA response to cAMP
GO:0070888 IEA E-box binding
GO:0070932 IMP histone H3 deacetylation
GO:0097167 IMP circadian regulation of translation
GO:1900015 ISS regulation of cytokine production involved in inflammatory response
GO:1900744 ISS regulation of p38MAPK cascade
GO:2000323 IMP negative regulation of glucocorticoid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012499 per1b protein_coding Danio_rerio
ENSDARG00000056885 per1a protein_coding Danio_rerio
ENSG00000179094 PER1 period circadian clock 1 protein_coding Homo_sapiens

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