ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027438 Ncl-001 ENSMUSG00000026234 10090 - 1:86344719-86359400 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027438
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027438 14.528±1.73 11.978±4.33 29.198±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IEA angiogenesis
GO:0003723 ISS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005938 IEA cell cortex
GO:0008022 IEA protein C-terminus binding
GO:0016020 IEA membrane
GO:0030529 ISS ribonucleoprotein complex
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0042162 ISS telomeric DNA binding
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901838 IEA positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322723 NCL-001 protein_coding Homo_sapiens 0 2320
ENST00000356936 NCL-015 protein_coding Homo_sapiens 0 702
ENST00000416078 NCLP2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000417652 NCL-011 protein_coding Homo_sapiens 0 466
ENST00000436894 NCL-013 protein_coding Homo_sapiens 0 453
ENST00000445357 NCLP1-001 processed_pseudogene Homo_sapiens 0 815
ENST00000453992 NCL-012 protein_coding Homo_sapiens 0 466
ENST00000454824 NCL-010 protein_coding Homo_sapiens 0 466
ENST00000461347 NCL-002 retained_intron Homo_sapiens 0 1253
ENST00000466274 NCL-016 retained_intron Homo_sapiens 0 464
ENST00000484328 NCL-009 retained_intron Homo_sapiens 4.99983e-42 174
ENST00000494618 NCL-014 retained_intron Homo_sapiens 0 704
ENST00000527320 RP11-672A2.7-001 processed_pseudogene Homo_sapiens 5.04467e-44 180

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