ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027109 Sp3 10090 - 2:72936427-72980446 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066003 Sp3-002 72936648-72980426 protein_coding
  ENSMUST00000102689 Sp3-001 72936427-72980446 protein_coding
  ENSMUST00000129565 Sp3-005 72938280-72941084 processed_transcript
  ENSMUST00000133615 Sp3-003 72936652-72979286 processed_transcript
  ENSMUST00000141372 Sp3-004 72946396-72970466 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000066003ENSMUST00000102689ENSMUST00000133615
Transcript ID C166 Tie2+ EC mES
ENSMUST00000066003 7.449±0.78 3.549±0.24 N/A
ENSMUST00000102689 15.678±2.28 9.052±5.38 3.147±0.70
ENSMUST00000133615 46.004±3.63 9.139±2.04 3.592±0.84

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007OE CIL_0007OE_0002 UCNEbase
CIL_0004JD CIL_0004JD_0002 CGP
CIL_0008JW CIL_0008JW_0002 VISTA
CIL_0008K1 CIL_0008K1_0002 VISTA
CIL_0008S8 CIL_0008S8_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0000987 IDA core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001503 IGI ossification
GO:0001701 IGI in utero embryonic development
GO:0001779 IMP natural killer cell differentiation
GO:0001829 IGI trophectodermal cell differentiation
GO:0001889 IGI liver development
GO:0001892 IGI embryonic placenta development
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003690 IDA double-stranded DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0017053 IDA transcriptional repressor complex
GO:0030183 IMP B cell differentiation
GO:0030217 IMP T cell differentiation
GO:0030218 IMP erythrocyte differentiation
GO:0030219 IGI megakaryocyte differentiation
GO:0030224 IMP monocyte differentiation
GO:0030324 IGI lung development
GO:0030851 IMP granulocyte differentiation
GO:0043353 IGI enucleate erythrocyte differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048596 IGI embryonic camera-type eye morphogenesis
GO:0048706 IGI embryonic skeletal system development
GO:0060136 IGI embryonic process involved in female pregnancy
GO:0060216 IGI definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001549 sp3a protein_coding Danio_rerio
ENSDARG00000007812 sp3b protein_coding Danio_rerio
ENSG00000172845 SP3 Sp3 transcription factor protein_coding Homo_sapiens

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