ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028681 Ptch2 10090 + 4:117096075-117116101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030443 Ptch2-001 117096075-117115383 protein_coding
  ENSMUST00000123226 Ptch2-003 117113424-117116101 retained_intron
  ENSMUST00000135133 Ptch2-006 117110235-117111088 retained_intron
  ENSMUST00000137209 Ptch2-005 117105238-117108514 nonsense_mediated_decay
  ENSMUST00000144620 Ptch2-002 117096096-117115383 nonsense_mediated_decay
  ENSMUST00000156989 Ptch2-004 117104920-117106313 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000030443ENSMUST00000123226ENSMUST00000137209ENSMUST00000144620
Transcript ID C166 Tie2+ EC mES
ENSMUST00000030443 0.005±0.00 0.971±0.51 1.664±1.34
ENSMUST00000123226 0.026±0.01 N/A 1.518±0.78
ENSMUST00000137209 0.059±0.00 N/A N/A
ENSMUST00000144620 0.010±0.01 0.357±0.00 0.599±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00093U CIL_00093U_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005119 IEA smoothened binding
GO:0007165 IEA signal transduction
GO:0008158 IEA hedgehog receptor activity
GO:0008544 IMP epidermis development
GO:0016021 IEA integral component of membrane
GO:0042633 IMP hair cycle
GO:0043588 IMP skin development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055026 ptch2 protein_coding Danio_rerio
ENSG00000117425 PTCH2 patched 2 protein_coding Homo_sapiens

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