ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029034 Cpsf3l 10090 + 4:155869546-155889103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030901 Cpsf3l-001 155869546-155889103 protein_coding
  ENSMUST00000120794 Cpsf3l-004 155869546-155888685 protein_coding
  ENSMUST00000132632 Cpsf3l-007 155888123-155888733 retained_intron
  ENSMUST00000134678 Cpsf3l-005 155869546-155888699 processed_transcript
  ENSMUST00000135844 Cpsf3l-006 155887779-155888487 retained_intron
  ENSMUST00000149458 Cpsf3l-002 155869567-155872312 retained_intron
  ENSMUST00000156460 Cpsf3l-003 155869615-155886919 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000030901ENSMUST00000120794
Transcript ID C166 Tie2+ EC mES
ENSMUST00000030901 11.034±1.63 14.660±10.38 8.534±0.40
ENSMUST00000120794 10.011±1.40 9.563±1.67 4.080±0.50

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016180 ISS snRNA processing
GO:0016787 IEA hydrolase activity
GO:0032039 ISS integrator complex
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025212 cpsf3l protein_coding Danio_rerio
ENSG00000127054 CPSF3L cleavage and polyadenylation specific factor 3-like protein_coding Homo_sapiens

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