ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029333 Rasgef1b 10090 - 5:99217426-99252927 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031276 Rasgef1b-001 99217426-99252927 protein_coding
  ENSMUST00000166484 Rasgef1b-003 99218774-99243240 protein_coding
  ENSMUST00000166632 Rasgef1b-004 99227794-99234066 retained_intron
  ENSMUST00000168092 Rasgef1b-002 99217426-99252927 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031276ENSMUST00000166484ENSMUST00000166632ENSMUST00000168092
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031276 0.024±0.01 0.537±0.15 0.884±0.27
ENSMUST00000166484 0.039±0.02 N/A N/A
ENSMUST00000166632 0.106±0.05 N/A N/A
ENSMUST00000168092 0.043±0.03 0.598±0.21 0.389±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000086 CIL_000086_0003 CGP
CIL_0008G8 CIL_0008G8_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005088 ISS Ras guanyl-nucleotide exchange factor activity
GO:0005768 IEA endosome
GO:0007264 IEA small GTPase mediated signal transduction
GO:0032320 ISS positive regulation of Ras GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033614 rasgef1ba protein_coding Danio_rerio
ENSDARG00000044251 rasgef1bb protein_coding Danio_rerio
ENSG00000138670 RASGEF1B RasGEF domain family, member 1B protein_coding Homo_sapiens

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