ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029836 Cbx3 10090 + 6:51470360-51483704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031862 Cbx3-002 51470530-51483704 protein_coding
  ENSMUST00000094623 Cbx3-001 51470360-51483033 protein_coding
  ENSMUST00000114445 Cbx3-004 51470666-51483704 protein_coding
  ENSMUST00000114446 Cbx3-005 51470695-51483704 protein_coding
  ENSMUST00000141711 Cbx3-007 51470746-51478600 protein_coding
  ENSMUST00000153699 Cbx3-006 51470677-51472060 retained_intron
  ENSMUST00000156463 Cbx3-003 51470663-51475241 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031862ENSMUST00000114446
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031862 97.854±5.39 34.096±16.64 56.386±15.05
ENSMUST00000114446 31.860±3.33 39.997±29.38 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007Y0 CIL_0007Y0_0002 VISTA
CIL_0007VE CIL_0007VE_0002 VISTA
CIL_0008Q3 CIL_0008Q3_0002 VISTA
CIL_000874 CIL_000874_0002 VISTA
CIL_0009DE CIL_0009DE_0002 VISTA
CIL_0002CO CIL_0002CO_0002 CGP
CIL_0007OD CIL_0007OD_0003 UCNEbase
CIL_0002CN CIL_0002CN_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005719 IEA nuclear euchromatin
GO:0005720 IEA nuclear heterochromatin
GO:0005819 IEA spindle
GO:0019899 IEA enzyme binding
GO:0019904 IEA protein domain specific binding
GO:0042802 IEA identical protein binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:1990226 IEA histone methyltransferase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003860 cbx3a protein_coding Danio_rerio
ENSG00000122565 CBX3 chromobox homolog 3 protein_coding Homo_sapiens

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