ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031862 Cbx3-002 ENSMUSG00000029836 10090 + 6:51470530-51483704 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031862
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031862 97.854±5.39 34.096±16.64 56.386±15.05

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0005515 IEA protein binding
GO:0005719 IEA nuclear euchromatin
GO:0005720 IEA nuclear heterochromatin
GO:0005819 IEA spindle
GO:0019899 IEA enzyme binding
GO:0019904 IEA protein domain specific binding
GO:0042802 IEA identical protein binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:1990226 IEA histone methyltransferase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086985 cbx5-201 protein_coding Danio_rerio 7e-27 126
ENSDART00000133259 cbx5-003 protein_coding Danio_rerio 7e-27 126
ENSDART00000142760 cbx5-005 protein_coding Danio_rerio 7e-27 126
ENSDART00000143340 cbx5-001 protein_coding Danio_rerio 7e-27 126
ENSDART00000147598 cbx5-006 protein_coding Danio_rerio 1e-24 119
ENST00000325243 CBX3P1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000337620 CBX3-001 protein_coding Homo_sapiens 0 931
ENST00000396386 CBX3-002 protein_coding Homo_sapiens 0 968
ENST00000402326 CBX3P9-001 processed_pseudogene Homo_sapiens 0 665
ENST00000409747 CBX3-003 protein_coding Homo_sapiens 0 579
ENST00000430257 CBX3P6-001 processed_pseudogene Homo_sapiens 0 385
ENST00000456948 CBX3-004 protein_coding Homo_sapiens 0 285
ENST00000462165 CBX3-006 protein_coding Homo_sapiens 0 444
ENST00000481057 CBX3-005 retained_intron Homo_sapiens 0 608
ENST00000481300 CBX3-007 retained_intron Homo_sapiens 0 322
ENST00000497498 CBX3-008 processed_transcript Homo_sapiens 0 558
ENST00000508108 CBX3P3-001 processed_pseudogene Homo_sapiens 0 521
ENST00000532412 CBX3P8-001 processed_pseudogene Homo_sapiens 0 438
ENST00000538909 CBX3P4-001 transcribed_processed_pseudogene Homo_sapiens 0 327
ENST00000552017 CBX3P5-001 processed_pseudogene Homo_sapiens 0 544

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