ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030539 Sema4b 10090 + 7:80186841-80226394 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032754 Sema4b-001 80186841-80226394 protein_coding
  ENSMUST00000107383 Sema4b-002 80186841-80221832 protein_coding
  ENSMUST00000123023 Sema4b-003 80198538-80214065 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000032754ENSMUST00000107383ENSMUST00000123023
Transcript ID C166 Tie2+ EC mES
ENSMUST00000032754 5.364±0.91 0.445±0.39 0.508±0.19
ENSMUST00000107383 N/A N/A 0.113±0.00
ENSMUST00000123023 N/A N/A 0.289±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00079J CIL_00079J_0002 CGP
CIL_0008AY CIL_0008AY_0002 VISTA
CIL_0000SV CIL_0000SV_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074414 sema4ba protein_coding Danio_rerio
ENSDARG00000076104 SEMA4B (2 of 2) protein_coding Danio_rerio
ENSG00000185033 SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein_coding Homo_sapiens

Loading