ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032754 Sema4b-001 ENSMUSG00000030539 10090 + 7:80186841-80226394 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000032754
Transcript ID C166 Tie2+ EC mES
ENSMUST00000032754 5.364±0.91 0.445±0.39 0.508±0.19

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113037 sema4c-201 protein_coding Danio_rerio 0.000005 58
ENST00000332496 SEMA4B-002 protein_coding Homo_sapiens 0 2250
ENST00000411539 SEMA4B-001 protein_coding Homo_sapiens 0 2250
ENST00000558051 SEMA4B-014 processed_transcript Homo_sapiens 0 433
ENST00000558065 SEMA4B-004 retained_intron Homo_sapiens 0 1943
ENST00000558848 SEMA4B-012 retained_intron Homo_sapiens 0 196
ENST00000559300 SEMA4B-011 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000560089 SEMA4B-003 nonsense_mediated_decay Homo_sapiens 0 2185
ENST00000561085 SEMA4B-010 protein_coding Homo_sapiens 0 403

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