ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040117 Secisbp2-001 ENSMUSG00000035139 10090 + 13:51651697-51684044 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000040117
Transcript ID C166 Tie2+ EC mES
ENSMUST00000040117 4.477±0.53 4.116±2.61 1.304±0.52

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001514 IMP selenocysteine incorporation
GO:0003730 IEA mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0030529 IDA ribonucleoprotein complex
GO:0035368 IDA selenocysteine insertion sequence binding
GO:0043021 IDA ribonucleoprotein complex binding
GO:0044822 IEA poly(A) RNA binding
GO:2000623 IMP negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339901 SECISBP2-004 protein_coding Homo_sapiens 0 1411
ENST00000375807 SECISBP2-001 protein_coding Homo_sapiens 0 1633
ENST00000498819 SECISBP2-008 processed_transcript Homo_sapiens 0 311
ENST00000534113 SECISBP2-201 protein_coding Homo_sapiens 0 1594

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