ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040681 Hmgn1 10090 - 16:96120618-96127729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050884 Hmgn1-001 96120618-96127729 protein_coding
  ENSMUST00000133885 Hmgn1-004 96122376-96127604 protein_coding
  ENSMUST00000142179 Hmgn1-002 96126605-96127466 retained_intron
  ENSMUST00000145713 Hmgn1-003 96122234-96125339 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000050884
Transcript ID C166 Tie2+ EC mES
ENSMUST00000050884 238.665±12.56 47.717±33.54 162.336±21.70

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007UB CIL_0007UB_0002 VISTA
CIL_0004KG CIL_0004KG_0002 CGP
CIL_0003GM CIL_0003GM_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000720 IMP pyrimidine dimer repair by nucleotide-excision repair
GO:0000785 IEA chromatin
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006283 IMP transcription-coupled nucleotide-excision repair
GO:0006325 IMP chromatin organization
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0010224 IMP response to UV-B
GO:0010225 IDA response to UV-C
GO:0031492 IEA nucleosomal DNA binding
GO:0040034 IGI regulation of development, heterochronic
GO:0048597 IMP post-embryonic camera-type eye morphogenesis
GO:0050678 IMP regulation of epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000205581 HMGN1 high mobility group nucleosome binding domain 1 protein_coding Homo_sapiens

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