ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153838 Setd2-001 ENSMUSG00000044791 10090 + 9:110532597-110618633 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000153838
Transcript ID C166 Tie2+ EC mES
ENSMUST00000153838 7.108±1.49 7.293±3.27 10.768±3.12

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001570 IMP vasculogenesis
GO:0001763 IMP morphogenesis of a branching structure
GO:0001843 IMP neural tube closure
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0006298 ISS mismatch repair
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006368 ISS transcription elongation from RNA polymerase II promoter
GO:0010452 IMP histone H3-K36 methylation
GO:0010468 IMP regulation of gene expression
GO:0010793 IEA regulation of mRNA export from nucleus
GO:0018023 IMP peptidyl-lysine trimethylation
GO:0018024 ISS histone-lysine N-methyltransferase activity
GO:0030900 IMP forebrain development
GO:0034728 ISS nucleosome organization
GO:0035441 IMP cell migration involved in vasculogenesis
GO:0048332 IMP mesoderm morphogenesis
GO:0048568 IMP embryonic organ development
GO:0048701 IMP embryonic cranial skeleton morphogenesis
GO:0048864 IMP stem cell development
GO:0060039 IMP pericardium development
GO:0060669 IMP embryonic placenta morphogenesis
GO:0060977 IMP coronary vasculature morphogenesis
GO:0097198 ISS histone H3-K36 trimethylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330022 SETD2-003 nonsense_mediated_decay Homo_sapiens 0 4087
ENST00000409792 SETD2-001 protein_coding Homo_sapiens 0 8512
ENST00000412450 SETD2-006 protein_coding Homo_sapiens 0 3731
ENST00000431180 SETD2-004 nonsense_mediated_decay Homo_sapiens 0 3720
ENST00000445387 SETD2-002 nonsense_mediated_decay Homo_sapiens 0 5114
ENST00000479832 SETD2-009 retained_intron Homo_sapiens 0 547
ENST00000492397 SETD2-008 processed_transcript Homo_sapiens 0 289

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