ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000075617 sox3-001 ENSDARG00000053569 7955 - 14:32402387-32404150 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; LECsUnknown1Unknown2ENSDART00000075617
Transcript ID LECs Unknown1 Unknown2
ENSDART00000075617 0.153±0.00 3.081±0.00 40.836±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007417 IMP central nervous system development
GO:0007422 IGI peripheral nervous system development
GO:0030182 IMP neuron differentiation
GO:0043049 IGI otic placode formation
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099151 Sox2-001 protein_coding Mus_musculus 0 244
ENSMUST00000170662 Sox21-001 protein_coding Mus_musculus 0 215
ENSMUST00000180353 Sox1-001 protein_coding Mus_musculus 0 246
ENST00000325404 SOX2-001 protein_coding Homo_sapiens 0 272
ENST00000330949 SOX1-001 protein_coding Homo_sapiens 0 279

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