ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002765 Prkd1-201 ENSMUSG00000002688 10090 - 12:50341231-50649223 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000002765
Transcript ID C166 Tie2+ EC mES
ENSMUST00000002765 4.213±0.46 1.047±0.50 1.946±1.14

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001938 IEA positive regulation of endothelial cell proliferation
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004697 IEA protein kinase C activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005802 IDA trans-Golgi network
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005938 IDA cell cortex
GO:0006915 IEA apoptotic process
GO:0006954 IEA inflammatory response
GO:0007030 ISS Golgi organization
GO:0010595 ISS positive regulation of endothelial cell migration
GO:0010837 IMP regulation of keratinocyte proliferation
GO:0010976 ISS positive regulation of neuron projection development
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0032793 IEA positive regulation of CREB transcription factor activity
GO:0033138 IEA positive regulation of peptidyl-serine phosphorylation
GO:0034599 ISS cellular response to oxidative stress
GO:0035924 ISS cellular response to vascular endothelial growth factor stimulus
GO:0038033 IEA positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway
GO:0042802 IEA identical protein binding
GO:0043123 ISS positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043536 IEA positive regulation of blood vessel endothelial cell migration
GO:0045087 IEA innate immune response
GO:0045669 IMP positive regulation of osteoblast differentiation
GO:0045766 ISS positive regulation of angiogenesis
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048010 IEA vascular endothelial growth factor receptor signaling pathway
GO:0048193 IMP Golgi vesicle transport
GO:0051092 ISS positive regulation of NF-kappaB transcription factor activity
GO:0060548 ISS negative regulation of cell death
GO:1901727 IEA positive regulation of histone deacetylase activity
GO:2001028 IEA positive regulation of endothelial cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331968 PRKD1-001 protein_coding Homo_sapiens 0 3825
ENST00000415220 PRKD1-002 protein_coding Homo_sapiens 0 3753
ENST00000468370 PRKD1-003 retained_intron Homo_sapiens 0 628
ENST00000490795 PRKD1-004 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000546371 PRKD1-007 protein_coding Homo_sapiens 0 446
ENST00000547441 PRKD1-005 processed_transcript Homo_sapiens 0 307
ENST00000549503 PRKD1-008 protein_coding Homo_sapiens 0 424
ENST00000551644 PRKD1-006 processed_transcript Homo_sapiens 0 372
ENST00000616995 PRKD1-201 protein_coding Homo_sapiens 0 3808
ENST00000621126 PRKD1-202 protein_coding Homo_sapiens 0 3552

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