ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004222 Hira-001 ENSMUSG00000022702 10090 + 16:18877066-18970309 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000004222
Transcript ID C166 Tie2+ EC mES
ENSMUST00000004222 7.847±1.59 7.214±1.65 3.914±0.04

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001649 IGI osteoblast differentiation
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0006336 IEA DNA replication-independent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007369 IMP gastrulation
GO:0016568 IEA chromatin modification
GO:0042692 IGI muscle cell differentiation
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000132164 hira-001 protein_coding Danio_rerio 0 815
ENST00000263208 HIRA-001 protein_coding Homo_sapiens 0 4649
ENST00000340170 HIRA-002 protein_coding Homo_sapiens 0 2593
ENST00000452818 HIRA-004 nonsense_mediated_decay Homo_sapiens 0 632
ENST00000464189 HIRA-003 processed_transcript Homo_sapiens 0 645
ENST00000509549 C22orf39-003 nonsense_mediated_decay Homo_sapiens 0 3121

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