ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004780 Arid3b-201 ENSMUSG00000004661 10090 - 9:57790513-57834236 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000004780
Transcript ID C166 Tie2+ EC
ENSMUST00000004780 0.919±0.22 0.699±0.36

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346246 ARID3B-001 protein_coding Homo_sapiens 0 1275
ENST00000448213 RP5-837I24.1-001 processed_pseudogene Homo_sapiens 0 1144
ENST00000563567 ARID3B-006 processed_transcript Homo_sapiens 0 193
ENST00000566147 ARID3B-004 protein_coding Homo_sapiens 0 475
ENST00000566468 ARID3B-005 retained_intron Homo_sapiens 0 346
ENST00000569680 ARID3B-002 retained_intron Homo_sapiens 0 806
ENST00000622429 ARID3B-201 protein_coding Homo_sapiens 0 1275

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