ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028900 Vps16-001 ENSMUSG00000027411 10090 + 2:130424365-130444269 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028900
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028900 21.006±0.96 6.700±4.81 16.256±5.81

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005765 IEA lysosomal membrane
GO:0005768 IEA endosome
GO:0005769 IDA early endosome
GO:0005770 IEA late endosome
GO:0005884 IDA actin filament
GO:0006886 IEA intracellular protein transport
GO:0030424 IEA axon
GO:0030897 IEA HOPS complex
GO:0043025 IEA neuronal cell body
GO:0046718 IMP viral entry into host cell
GO:0051015 IEA actin filament binding
GO:0055037 IEA recycling endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380393 PTPRA-003 protein_coding Homo_sapiens 0 721
ENST00000380443 VPS16-006 protein_coding Homo_sapiens 0 1698
ENST00000380445 VPS16-001 protein_coding Homo_sapiens 0 3219
ENST00000380469 VPS16-003 protein_coding Homo_sapiens 0 1550
ENST00000417508 VPS16-004 protein_coding Homo_sapiens 0 835
ENST00000453689 VPS16-005 protein_coding Homo_sapiens 0 652
ENST00000466415 VPS16-007 processed_transcript Homo_sapiens 0 337
ENST00000481812 VPS16-008 processed_transcript Homo_sapiens 0 778
ENST00000487461 VPS16-002 processed_transcript Homo_sapiens 0 521

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