ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033882 Chrna6-201 ENSMUSG00000031491 10090 - 8:27403214-27413944 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; mESENSMUST00000033882
Transcript ID mES
ENSMUST00000033882 0.033±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004889 IMP acetylcholine-activated cation-selective channel activity
GO:0005515 IPI protein binding
GO:0005892 IDA acetylcholine-gated channel complex
GO:0006812 IMP cation transport
GO:0014059 IMP regulation of dopamine secretion
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane
GO:0051899 IMP membrane depolarization
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000031546 chrna6-001 protein_coding Danio_rerio 0 420
ENSDART00000079613 chrna2b-201 protein_coding Danio_rerio 0 211
ENSDART00000136317 chrna2b-001 protein_coding Danio_rerio 0 211
ENST00000240132 CHRNA2-004 protein_coding Homo_sapiens 0 294
ENST00000276410 CHRNA6-001 protein_coding Homo_sapiens 0 1271
ENST00000326828 CHRNA3-001 protein_coding Homo_sapiens 0 470
ENST00000348639 CHRNA3-002 protein_coding Homo_sapiens 0 470
ENST00000370263 CHRNA4-001 protein_coding Homo_sapiens 0 276
ENST00000407991 CHRNA2-201 protein_coding Homo_sapiens 0 294
ENST00000463705 CHRNA4-002 processed_transcript Homo_sapiens 0 276
ENST00000467563 CHRNA4-004 processed_transcript Homo_sapiens 0 276
ENST00000498043 CHRNA4-007 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000520933 CHRNA2-001 protein_coding Homo_sapiens 0 294
ENST00000523529 CHRNA2-006 retained_intron Homo_sapiens 0 294
ENST00000523695 CHRNA2-005 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000534622 CHRNA6-004 protein_coding Homo_sapiens 0 1092
ENST00000558903 CHRNA3-008 processed_transcript Homo_sapiens 0 285
ENST00000559658 CHRNA3-003 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000615287 CHRNA4-201 protein_coding Homo_sapiens 0 276

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