ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034776 Cln6-001 ENSMUSG00000032245 10090 + 9:62838785-62852006 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000034776
Transcript ID C166 Tie2+ EC mES
ENSMUST00000034776 25.272±1.58 3.733±2.27 13.345±5.21

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001573 ISS ganglioside metabolic process
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005783 ISS endoplasmic reticulum
GO:0005788 ISS endoplasmic reticulum lumen
GO:0007040 IMP lysosome organization
GO:0007042 ISS lysosomal lumen acidification
GO:0007601 IMP visual perception
GO:0008203 ISS cholesterol metabolic process
GO:0016020 IEA membrane
GO:0030203 ISS glycosaminoglycan metabolic process
GO:0031987 IMP locomotion involved in locomotory behavior
GO:0042803 ISS protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044265 IMP cellular macromolecule catabolic process
GO:0045862 ISS positive regulation of proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249806 CLN6-001 protein_coding Homo_sapiens 0 1050
ENST00000538696 CLN6-004 protein_coding Homo_sapiens 0 1013
ENST00000563917 CLN6-007 retained_intron Homo_sapiens 0 220
ENST00000564752 CLN6-006 protein_coding Homo_sapiens 0 715
ENST00000564846 CLN6-002 retained_intron Homo_sapiens 0 244
ENST00000565471 CLN6-008 protein_coding Homo_sapiens 0 494
ENST00000566347 CLN6-005 protein_coding Homo_sapiens 0 569
ENST00000567060 CLN6-003 nonsense_mediated_decay Homo_sapiens 0 424
ENST00000569336 CLN6-009 processed_transcript Homo_sapiens 1e-39 167

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