ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048934 Tbr1-001 ENSMUSG00000035033 10090 + 2:61804453-61814114 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000048934
Transcript ID C166 Tie2+ EC mES
ENSMUST00000048934 0.017±0.01 0.172±0.00 0.043±0.02

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005622 IDA intracellular
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007411 IMP axon guidance
GO:0010092 IMP specification of organ identity
GO:0010468 IMP regulation of gene expression
GO:0010975 IMP regulation of neuron projection development
GO:0021902 IGI commitment of neuronal cell to specific neuron type in forebrain
GO:0030182 IMP neuron differentiation
GO:0030902 IMP hindbrain development
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389554 TBR1-001 protein_coding Homo_sapiens 0 5334
ENST00000410035 TBR1-002 protein_coding Homo_sapiens 0 1849
ENST00000411412 TBR1-006 protein_coding Homo_sapiens 0 771
ENST00000463544 TBR1-005 retained_intron Homo_sapiens 0 1234
ENST00000477804 TBR1-003 processed_transcript Homo_sapiens 0 584
ENST00000482861 SLC4A10-007 processed_transcript Homo_sapiens 0 292
ENST00000605990 SLC4A10-008 processed_transcript Homo_sapiens 0 291

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