ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049272 Hoxb5-001 ENSMUSG00000038700 10090 + 11:96303512-96306120 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000049272
Transcript ID C166 Tie2+ EC mES
ENSMUST00000049272 0.019±0.00 12.904±6.41 16.380±9.79

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0009952 IGI anterior/posterior pattern specification
GO:0045446 IDA endothelial cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048704 IGI embryonic skeletal system morphogenesis
GO:0048706 IGI embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000025449 hoxb5a-001 protein_coding Danio_rerio 0 475
ENSDART00000076161 hoxb5b-001 protein_coding Danio_rerio 0 252
ENSDART00000103134 hoxc5a-201 protein_coding Danio_rerio 3e-25 121
ENSDART00000139319 hoxc5a-001 protein_coding Danio_rerio 3e-25 121
ENST00000239151 HOXB5-001 protein_coding Homo_sapiens 0 2285

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