ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050029 Six1-001 ENSMUSG00000051367 10090 - 12:73041827-73047179 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000050029
Transcript ID C166 Tie2+ EC mES
ENSMUST00000050029 0.487±0.15 0.023±0.01 0.257±0.12

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001657 IMP ureteric bud development
GO:0001658 IGI branching involved in ureteric bud morphogenesis
GO:0001759 IMP organ induction
GO:0001822 IMP kidney development
GO:0003151 IGI outflow tract morphogenesis
GO:0003682 IGI chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0007389 IGI pattern specification process
GO:0007519 IGI skeletal muscle tissue development
GO:0007605 IMP sensory perception of sound
GO:0008582 IGI regulation of synaptic growth at neuromuscular junction
GO:0010468 IGI regulation of gene expression
GO:0014842 IDA regulation of satellite cell proliferation
GO:0021610 IMP facial nerve morphogenesis
GO:0022008 IMP neurogenesis
GO:0030855 IMP epithelial cell differentiation
GO:0030878 IMP thyroid gland development
GO:0030910 IMP olfactory placode formation
GO:0032880 IGI regulation of protein localization
GO:0034504 IEA protein localization to nucleus
GO:0035909 IGI aorta morphogenesis
GO:0042472 IGI inner ear morphogenesis
GO:0042474 IMP middle ear morphogenesis
GO:0043066 IMP negative regulation of apoptotic process
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0043586 IMP tongue development
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045664 IMP regulation of neuron differentiation
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IGI thymus development
GO:0048665 IGI neuron fate specification
GO:0048699 IMP generation of neurons
GO:0048701 IGI embryonic cranial skeleton morphogenesis
GO:0048704 IGI embryonic skeletal system morphogenesis
GO:0048705 IMP skeletal system morphogenesis
GO:0048839 IMP inner ear development
GO:0048856 IGI anatomical structure development
GO:0050678 IMP regulation of epithelial cell proliferation
GO:0051451 IGI myoblast migration
GO:0060037 IMP pharyngeal system development
GO:0061055 IMP myotome development
GO:0061197 IMP fungiform papilla morphogenesis
GO:0061551 IMP trigeminal ganglion development
GO:0071599 IMP otic vesicle development
GO:0072001 IGI renal system development
GO:0072075 IMP metanephric mesenchyme development
GO:0072095 IMP regulation of branch elongation involved in ureteric bud branching
GO:0072107 IMP positive regulation of ureteric bud formation
GO:0072172 IMP mesonephric tubule formation
GO:0072193 IMP ureter smooth muscle cell differentiation
GO:0072513 IGI positive regulation of secondary heart field cardioblast proliferation
GO:0090103 IMP cochlea morphogenesis
GO:0090190 IMP positive regulation of branching involved in ureteric bud morphogenesis
GO:0090191 IMP negative regulation of branching involved in ureteric bud morphogenesis
GO:2000729 IGI positive regulation of mesenchymal cell proliferation involved in ureter development
GO:2001014 IDA regulation of skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247182 SIX1-001 protein_coding Homo_sapiens 0 1622
ENST00000303077 SIX2-001 protein_coding Homo_sapiens 0 676
ENST00000553535 SIX1-002 processed_transcript Homo_sapiens 0 606
ENST00000554986 SIX1-005 protein_coding Homo_sapiens 0 728
ENST00000555955 SIX1-004 retained_intron Homo_sapiens 0 606

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