ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050078 Sdf4-001 ENSMUSG00000029076 10090 + 4:155992911-156013610 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000050078
Transcript ID C166 Tie2+ EC mES
ENSMUST00000050078 4.226±0.29 4.756±2.21 2.193±0.17

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005770 ISS late endosome
GO:0005794 IEA Golgi apparatus
GO:0005796 IDA Golgi lumen
GO:0005886 IEA plasma membrane
GO:0009650 ISS UV protection
GO:0016020 IEA membrane
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0021549 ISS cerebellum development
GO:0042802 IEA identical protein binding
GO:0045444 IEP fat cell differentiation
GO:0045471 ISS response to ethanol
GO:0070062 IEA extracellular vesicular exosome
GO:0070625 IEA zymogen granule exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263741 SDF4-007 protein_coding Homo_sapiens 0 822
ENST00000360001 SDF4-001 protein_coding Homo_sapiens 0 1009
ENST00000403997 SDF4-006 protein_coding Homo_sapiens 0 344
ENST00000459994 SDF4-005 processed_transcript Homo_sapiens 0 270
ENST00000465727 SDF4-002 nonsense_mediated_decay Homo_sapiens 0 754
ENST00000478938 SDF4-004 retained_intron Homo_sapiens 0 370
ENST00000494748 SDF4-003 retained_intron Homo_sapiens 0 534

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