ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057500 Rnf7-001 ENSMUSG00000051234 10090 - 9:96470937-96478675 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000057500
Transcript ID C166 Tie2+ EC mES
ENSMUST00000057500 40.328±5.43 58.755±18.38 51.338±4.24

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006919 IDA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008270 IEA zinc ion binding
GO:0008631 IDA intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0008637 IDA apoptotic mitochondrial changes
GO:0016567 IEA protein ubiquitination
GO:0019788 ISS NEDD8 ligase activity
GO:0043066 IDA negative regulation of apoptotic process
GO:0045116 ISS protein neddylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273480 RNF7-001 protein_coding Homo_sapiens 0 542
ENST00000393000 RNF7-002 protein_coding Homo_sapiens 0 494
ENST00000477012 RNF7-003 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000477393 RNF7-004 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000478598 RNF7P1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000480908 RNF7-007 protein_coding Homo_sapiens 0 267
ENST00000498828 RNF7-006 retained_intron Homo_sapiens 0 272

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