ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092295 Mbd3-001 ENSMUSG00000035478 10090 - 10:80392539-80399550 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000092295
Transcript ID C166 Tie2+ EC mES
ENSMUST00000092295 10.720±1.07 10.373±6.43 9.898±0.27

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000785 IDA chromatin
GO:0000790 IEA nuclear chromatin
GO:0000792 IDA heterochromatin
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001701 IMP in utero embryonic development
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006346 IDA methylation-dependent chromatin silencing
GO:0006351 IEA transcription, DNA-templated
GO:0008327 ISS methyl-CpG binding
GO:0009888 IMP tissue development
GO:0016573 IMP histone acetylation
GO:0016581 IPI NuRD complex
GO:0031492 IEA nucleosomal DNA binding
GO:0043044 IEA ATP-dependent chromatin remodeling
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000156825 MBD3-002 protein_coding Homo_sapiens 0 846
ENST00000434436 MBD3-001 protein_coding Homo_sapiens 0 1064
ENST00000585937 UQCR11-001 nonsense_mediated_decay Homo_sapiens 0 845
ENST00000585967 MBD3-004 protein_coding Homo_sapiens 0 592
ENST00000589064 MBD3-010 processed_transcript Homo_sapiens 0 821
ENST00000590550 MBD3-009 protein_coding Homo_sapiens 0 846
ENST00000590830 MBD3-008 retained_intron Homo_sapiens 0 645
ENST00000592012 MBD3-007 nonsense_mediated_decay Homo_sapiens 0 821
ENST00000592361 MBD3-005 protein_coding Homo_sapiens 0 540

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