ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102774 Sqstm1-001 ENSMUSG00000015837 10090 - 11:50200152-50210827 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000102774
Transcript ID C166 Tie2+ EC mES
ENSMUST00000102774 209.685±14.67 187.959±182.28 18.721±5.72

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000407 IDA pre-autophagosomal structure
GO:0000932 ISS cytoplasmic mRNA processing body
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0002376 IEA immune system process
GO:0003712 TAS transcription cofactor activity
GO:0005080 ISS protein kinase C binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0005776 ISS autophagic vacuole
GO:0005783 IEA endoplasmic reticulum
GO:0006914 ISS autophagy
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016234 IEA inclusion body
GO:0016235 IDA aggresome
GO:0016236 ISS macroautophagy
GO:0016239 IEA positive regulation of macroautophagy
GO:0016605 IEA PML body
GO:0019901 IEA protein kinase binding
GO:0030154 IEA cell differentiation
GO:0031410 IEA cytoplasmic vesicle
GO:0042169 ISS SH2 domain binding
GO:0042802 IDA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0043122 ISS regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 ISS ubiquitin binding
GO:0051291 IEA protein heterooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0070530 IDA K63-linked polyubiquitin binding
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360718 SQSTM1-002 protein_coding Homo_sapiens 0 1208
ENST00000389805 SQSTM1-001 protein_coding Homo_sapiens 0 1459
ENST00000422245 SQSTM1-003 protein_coding Homo_sapiens 0 523
ENST00000453046 SQSTM1-008 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000466342 SQSTM1-007 retained_intron Homo_sapiens 0 590
ENST00000485412 SQSTM1-006 retained_intron Homo_sapiens 0 388
ENST00000504627 SQSTM1-017 protein_coding Homo_sapiens 0 254
ENST00000508284 SQSTM1-016 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000510187 SQSTM1-013 protein_coding Homo_sapiens 0 970
ENST00000514093 SQSTM1-015 protein_coding Homo_sapiens 0 614
ENST00000522663 C5orf45-004 nonsense_mediated_decay Homo_sapiens 0 215

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