ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103238 Sema6d-007 ENSMUSG00000027200 10090 + 2:124653635-124665309 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Expression Patterns


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Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000103238
Transcript ID C166 Tie2+ EC
ENSMUST00000103238 3.728±0.89 18.974±6.59

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0014911 IDA positive regulation of smooth muscle cell migration
GO:0014912 IDA negative regulation of smooth muscle cell migration
GO:0016021 IEA integral component of membrane
GO:0021591 IDA ventricular system development
GO:0030154 IEA cell differentiation
GO:0030215 IPI semaphorin receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000136361 sema6d-001 protein_coding Danio_rerio 0 219
ENST00000316364 SEMA6D-004 protein_coding Homo_sapiens 0 2069
ENST00000354744 SEMA6D-005 protein_coding Homo_sapiens 0 2069
ENST00000355997 SEMA6D-201 protein_coding Homo_sapiens 0 2119
ENST00000358066 SEMA6D-006 protein_coding Homo_sapiens 0 2013
ENST00000389425 SEMA6D-003 protein_coding Homo_sapiens 0 1779
ENST00000389428 SEMA6D-007 protein_coding Homo_sapiens 0 2069
ENST00000536845 SEMA6D-002 protein_coding Homo_sapiens 0 2069
ENST00000537942 SEMA6D-202 protein_coding Homo_sapiens 0 2013
ENST00000558014 SEMA6D-001 protein_coding Homo_sapiens 0 2013
ENST00000558816 SEMA6D-008 protein_coding Homo_sapiens 0 2119
ENST00000559196 SEMA6D-013 protein_coding Homo_sapiens 0 804
ENST00000560006 SEMA6D-016 protein_coding Homo_sapiens 0 577
ENST00000561133 SEMA6D-012 protein_coding Homo_sapiens 0 529

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