ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105365 Cirbp-001 ENSMUSG00000045193 10090 + 10:80167778-80171655 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000105365
Transcript ID C166 Tie2+ EC mES
ENSMUST00000105365 4.607±0.95 32.171±6.65 8.308±3.64

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0009409 IEA response to cold
GO:0009411 ISS response to UV
GO:0010494 IDA cytoplasmic stress granule
GO:0017148 IDA negative regulation of translation
GO:0030371 IDA translation repressor activity
GO:0034063 IDA stress granule assembly
GO:0045727 ISS positive regulation of translation
GO:0048255 ISS mRNA stabilization
GO:0070181 ISS small ribosomal subunit rRNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320936 CIRBP-001 protein_coding Homo_sapiens 0 200
ENST00000413636 CIRBP-008 protein_coding Homo_sapiens 0 200
ENST00000586472 CIRBP-034 protein_coding Homo_sapiens 0 200
ENST00000586548 CIRBP-021 protein_coding Homo_sapiens 0 200
ENST00000587169 CIRBP-004 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000588030 CIRBP-011 protein_coding Homo_sapiens 0 200
ENST00000588090 CIRBP-018 protein_coding Homo_sapiens 0 200
ENST00000588917 CIRBP-044 retained_intron Homo_sapiens 0 200
ENST00000589710 CIRBP-005 protein_coding Homo_sapiens 0 200
ENST00000590347 CIRBP-009 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000593093 CIRBP-002 retained_intron Homo_sapiens 0 200

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