ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107048 Rab6a-003 ENSMUSG00000030704 10090 + 7:100607410-100641268 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000107048
Transcript ID C166 Tie2+ EC mES
ENSMUST00000107048 14.253±3.94 14.914±1.39 10.080±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0006886 TAS intracellular protein transport
GO:0007264 IEA small GTPase mediated signal transduction
GO:0018125 ISO peptidyl-cysteine methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075056 rab41-002 protein_coding Danio_rerio 0 388
ENSDART00000138294 rab41-003 protein_coding Danio_rerio 0 372
ENSDART00000045555 rab41-001 protein_coding Danio_rerio 0 355
ENSDART00000042255 rab6bb-001 protein_coding Danio_rerio 0 329
ENSDART00000123624 rab6bb-002 retained_intron Danio_rerio 0 267
ENST00000310653 RAB6A-001 protein_coding Homo_sapiens 0 2370
ENST00000336083 RAB6A-002 protein_coding Homo_sapiens 0 2220
ENST00000400470 RAB6A-010 protein_coding Homo_sapiens 0 553
ENST00000410061 RAB6C-001 protein_coding Homo_sapiens 0 1299
ENST00000412425 RAB6C-AS1-002 processed_transcript Homo_sapiens 0 276
ENST00000484914 AC073869.1-001 transcribed_processed_pseudogene Homo_sapiens 0 922
ENST00000536566 RAB6A-201 protein_coding Homo_sapiens 0 2370
ENST00000537446 RAB6A-011 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000540771 RAB6A-014 protein_coding Homo_sapiens 1e-25 121
ENST00000541588 RAB6A-013 protein_coding Homo_sapiens 0 193
ENST00000541795 RAB6A-005 retained_intron Homo_sapiens 2e-17 95
ENST00000541973 RAB6A-006 protein_coding Homo_sapiens 0 1345
ENST00000545625 RAB6A-012 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000623617 AC073869.1-002 processed_transcript Homo_sapiens 0 924
ENST00000624615 RAB6C-AS1-003 TEC Homo_sapiens 0 320

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