ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107914 Tpm2-001 ENSMUSG00000028464 10090 - 4:43514711-43523595 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000107914
Transcript ID C166 Tie2+ EC mES
ENSMUST00000107914 86.160±31.01 1.599±0.87 44.882±22.66

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005862 TAS muscle thin filament tropomyosin
GO:0006936 TAS muscle contraction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267996 TPM1-005 protein_coding Homo_sapiens 0 320
ENST00000288398 TPM1-001 protein_coding Homo_sapiens 0 449
ENST00000329305 TPM2-006 protein_coding Homo_sapiens 0 1142
ENST00000344824 TPM4-001 protein_coding Homo_sapiens 0 601
ENST00000357980 TPM1-008 protein_coding Homo_sapiens 2e-27 128
ENST00000358278 TPM1-018 protein_coding Homo_sapiens 0 464
ENST00000360958 TPM2-002 protein_coding Homo_sapiens 0 1009
ENST00000378292 TPM2-001 protein_coding Homo_sapiens 0 1454
ENST00000378300 TPM2-005 protein_coding Homo_sapiens 0 1007
ENST00000403994 TPM1-002 protein_coding Homo_sapiens 0 427
ENST00000471212 TPM2-003 retained_intron Homo_sapiens 0 989
ENST00000486018 TPM2-004 retained_intron Homo_sapiens 0 274
ENST00000520558 RP11-756G12.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000558314 TPM1-006 retained_intron Homo_sapiens 1e-27 128
ENST00000558347 TPM1-009 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000559397 TPM1-010 protein_coding Homo_sapiens 0 342
ENST00000559556 TPM1-028 protein_coding Homo_sapiens 0 442
ENST00000560445 TPM1-019 protein_coding Homo_sapiens 3e-30 135
ENST00000560975 TPM1-007 retained_intron Homo_sapiens 2e-24 119
ENST00000561425 TPM1-020 nonsense_mediated_decay Homo_sapiens 3e-26 122
ENST00000589897 TPM4-007 protein_coding Homo_sapiens 0 219
ENST00000604975 TPM2-007 retained_intron Homo_sapiens 0 340
ENST00000607559 TPM2-008 protein_coding Homo_sapiens 0 285
ENST00000610733 TPM1-034 protein_coding Homo_sapiens 8.96831e-44 183

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