ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109024 Lima1-003 ENSMUSG00000023022 10090 - 15:99778470-99820143 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000109024
Transcript ID C166 Tie2+ EC mES
ENSMUST00000109024 38.722±3.26 11.518±5.63 2.969±1.72

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 ISS stress fiber
GO:0003785 ISS actin monomer binding
GO:0005925 ISS focal adhesion
GO:0008270 IEA zinc ion binding
GO:0015629 IDA actin cytoskeleton
GO:0030835 ISS negative regulation of actin filament depolymerization
GO:0031529 ISS ruffle organization
GO:0051015 ISS actin filament binding
GO:0051017 ISS actin filament bundle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341247 LIMA1-003 protein_coding Homo_sapiens 0 1487
ENST00000394943 LIMA1-001 protein_coding Homo_sapiens 0 1472
ENST00000547825 LIMA1-007 protein_coding Homo_sapiens 0 961
ENST00000549064 LIMA1-014 retained_intron Homo_sapiens 0 518
ENST00000550592 LIMA1-008 protein_coding Homo_sapiens 9e-36 154
ENST00000550611 LIMA1-010 processed_transcript Homo_sapiens 9.94922e-44 180
ENST00000551691 LIMA1-009 protein_coding Homo_sapiens 5.99756e-43 178
ENST00000552338 LIMA1-015 processed_transcript Homo_sapiens 0 436
ENST00000552491 LIMA1-017 protein_coding Homo_sapiens 0 935
ENST00000552720 LIMA1-005 nonsense_mediated_decay Homo_sapiens 0 795
ENST00000552783 LIMA1-002 protein_coding Homo_sapiens 0 1650
ENST00000552823 LIMA1-006 protein_coding Homo_sapiens 0 1365
ENST00000552909 LIMA1-004 protein_coding Homo_sapiens 0 1356

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