ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: LIM domain and actin binding 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341247 LIMA1-003 ENSG00000050405 9606 - 12:50175788-50283546 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000341247
Transcript ID HAoEC HUVEC
ENST00000341247 18.041±8.63 4.090±2.61

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0003785 IDA actin monomer binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0008270 IEA zinc ion binding
GO:0015629 IDA actin cytoskeleton
GO:0030835 IEA:IDA negative regulation of actin filament depolymerization
GO:0031529 IDA ruffle organization
GO:0051015 IEA:IDA actin filament binding
GO:0051017 IEA:IDA actin filament bundle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073691 Lima1-001 protein_coding Mus_musculus 0 1718
ENSMUST00000109024 Lima1-003 protein_coding Mus_musculus 0 1487
ENSMUST00000172119 Lima1-004 retained_intron Mus_musculus 0 237
ENSMUST00000171450 Lima1-002 retained_intron Mus_musculus 0 196

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