ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113707 Tpm1-001 ENSMUSG00000032366 10090 - 9:67022590-67049406 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166mESENSMUST00000113707
Transcript ID C166 mES
ENSMUST00000113707 274.199±90.73 61.841±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001725 IEA stress fiber
GO:0003065 IMP positive regulation of heart rate by epinephrine
GO:0003779 IEA actin binding
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005737 IDA cytoplasm
GO:0005862 TAS muscle thin filament tropomyosin
GO:0008092 IEA cytoskeletal protein binding
GO:0030016 IDA myofibril
GO:0031941 IDA filamentous actin
GO:0032059 IEA bleb
GO:0032587 IEA ruffle membrane
GO:0034614 IEA cellular response to reactive oxygen species
GO:0045214 IEA sarcomere organization
GO:0055010 IMP ventricular cardiac muscle tissue morphogenesis
GO:0060048 IMP cardiac muscle contraction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000039657 tpma-201 protein_coding Danio_rerio 0 750
ENSDART00000125892 TPM1 (2 of 2)-203 protein_coding Danio_rerio 0 750
ENSDART00000014851 TPM1 (2 of 2)-201 protein_coding Danio_rerio 0 671
ENSDART00000151375 tpm3-004 protein_coding Danio_rerio 0 632
ENSDART00000027598 tpm3-001 protein_coding Danio_rerio 0 625
ENSDART00000121680 TPM1 (2 of 2)-202 protein_coding Danio_rerio 0 621
ENSDART00000131098 TPM1 (2 of 2)-204 protein_coding Danio_rerio 0 429
ENSDART00000010997 tpm3-003 protein_coding Danio_rerio 0 416
ENST00000267996 TPM1-005 protein_coding Homo_sapiens 0 1214
ENST00000288398 TPM1-001 protein_coding Homo_sapiens 0 1253
ENST00000317516 TPM1-016 protein_coding Homo_sapiens 0 675
ENST00000329305 TPM2-006 protein_coding Homo_sapiens 0 586
ENST00000334895 TPM1-011 protein_coding Homo_sapiens 0 824
ENST00000357980 TPM1-008 protein_coding Homo_sapiens 0 1417
ENST00000358278 TPM1-018 protein_coding Homo_sapiens 0 1565
ENST00000360958 TPM2-002 protein_coding Homo_sapiens 0 564
ENST00000378292 TPM2-001 protein_coding Homo_sapiens 0 508
ENST00000378300 TPM2-005 protein_coding Homo_sapiens 0 566
ENST00000403994 TPM1-002 protein_coding Homo_sapiens 0 1253
ENST00000404484 TPM1-012 protein_coding Homo_sapiens 0 1048
ENST00000471212 TPM2-003 retained_intron Homo_sapiens 0 448
ENST00000558072 TPM1-025 retained_intron Homo_sapiens 0 364
ENST00000558264 TPM1-017 nonsense_mediated_decay Homo_sapiens 0 708
ENST00000558314 TPM1-006 retained_intron Homo_sapiens 0 725
ENST00000558347 TPM1-009 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000558400 TPM1-030 retained_intron Homo_sapiens 0 381
ENST00000558544 TPM1-013 nonsense_mediated_decay Homo_sapiens 0 845
ENST00000558868 TPM1-021 retained_intron Homo_sapiens 0 503
ENST00000559108 TPM1-031 retained_intron Homo_sapiens 0 191
ENST00000559281 TPM1-015 protein_coding Homo_sapiens 0 824
ENST00000559397 TPM1-010 protein_coding Homo_sapiens 0 1048
ENST00000559556 TPM1-028 protein_coding Homo_sapiens 0 1424
ENST00000559831 TPM1-029 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000560445 TPM1-019 protein_coding Homo_sapiens 0 353
ENST00000560615 TPM1-022 protein_coding Homo_sapiens 0 566
ENST00000560679 TPM1-024 protein_coding Homo_sapiens 0 246
ENST00000560959 TPM1-014 protein_coding Homo_sapiens 0 673
ENST00000560970 TPM1-003 protein_coding Homo_sapiens 0 1110
ENST00000560975 TPM1-007 retained_intron Homo_sapiens 0 514
ENST00000561242 TPM1-032 retained_intron Homo_sapiens 0 217
ENST00000561266 TPM1-027 protein_coding Homo_sapiens 0 824
ENST00000561395 TPM1-033 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000561425 TPM1-020 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000604975 TPM2-007 retained_intron Homo_sapiens 8e-27 124
ENST00000610733 TPM1-034 protein_coding Homo_sapiens 0 520

Loading