ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115231 Rpl39-001 ENSMUSG00000079641 10090 - X:37082520-37085402 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000115231
Transcript ID C166 Tie2+ EC mES
ENSMUST00000115231 820.041±46.34 939.791±718.94 2064.230±564.68

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002227 IEA innate immune response in mucosa
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005615 IEA extracellular space
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0019731 IEA antibacterial humoral response
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0050830 IEA defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273411 RPL39P5-002 processed_transcript Homo_sapiens 0 207
ENST00000296277 RPL39L-002 protein_coding Homo_sapiens 0 196
ENST00000361575 RPL39-001 protein_coding Homo_sapiens 0 244
ENST00000409627 SUMO1-006 nonsense_mediated_decay Homo_sapiens 0.000000006 66
ENST00000416137 RP3-522D1.2-001 processed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000422215 RP11-307O1.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 178
ENST00000423619 RP11-54O7.10-001 processed_pseudogene Homo_sapiens 0 189
ENST00000424573 RPL39P3-001 processed_pseudogene Homo_sapiens 0 200
ENST00000426171 RP11-415H23.4-001 processed_pseudogene Homo_sapiens 1e-33 145
ENST00000433055 RPL39L-003 protein_coding Homo_sapiens 0 196
ENST00000439897 RP11-91I11.1-001 processed_pseudogene Homo_sapiens 4.06377e-44 180
ENST00000441819 AC069257.6-001 processed_pseudogene Homo_sapiens 5e-33 143
ENST00000443146 AC004920.2-001 processed_pseudogene Homo_sapiens 1e-39 165
ENST00000447385 AC020550.7-001 processed_pseudogene Homo_sapiens 5.00264e-43 176
ENST00000447779 RPL39P29-001 processed_pseudogene Homo_sapiens 3e-25 117
ENST00000449384 RPL39P25-001 processed_pseudogene Homo_sapiens 3e-40 167
ENST00000453523 AC079354.6-001 processed_pseudogene Homo_sapiens 9.94922e-44 178
ENST00000455270 RPL39L-001 protein_coding Homo_sapiens 0 196
ENST00000455840 RP3-481F12.1-001 processed_pseudogene Homo_sapiens 3e-30 134
ENST00000459631 CTD-3141N22.1-001 transcribed_processed_pseudogene Homo_sapiens 6e-37 156
ENST00000465012 RP11-178L8.1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000467003 ZNF525-001 protein_coding Homo_sapiens 5.00264e-43 182
ENST00000468844 RPL39-002 processed_transcript Homo_sapiens 0 204
ENST00000475179 ZNF525-003 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000480211 RP11-318G8.1-001 processed_pseudogene Homo_sapiens 2.8026e-45 183
ENST00000490784 RPL39P36-001 processed_pseudogene Homo_sapiens 1e-38 161
ENST00000495111 RP11-1094M14.1-001 processed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000512505 RPL39P5-001 transcribed_processed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000543629 LMNTD1-011 protein_coding Homo_sapiens 2e-33 147
ENST00000624073 ZNF525-201 protein_coding Homo_sapiens 3e-40 167

Loading