ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127737 Ybx1-004 ENSMUSG00000028639 10090 - 4:119277990-119282792 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECENSMUST00000127737
Transcript ID Tie2+ EC
ENSMUST00000127737 103.773±26.95

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001701 IGI in utero embryonic development
GO:0003697 IDA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IGI nucleus
GO:0005737 IDA cytoplasm
GO:0051154 IDA negative regulation of striated muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321358 YBX1-001 protein_coding Homo_sapiens 0 1589
ENST00000332220 YBX1-004 protein_coding Homo_sapiens 0 634
ENST00000436427 YBX1-002 protein_coding Homo_sapiens 0 1589
ENST00000442962 YBX1P6-001 processed_pseudogene Homo_sapiens 0 699
ENST00000444752 YBX1P10-001 processed_pseudogene Homo_sapiens 0 918
ENST00000445822 YBX1P1-001 processed_pseudogene Homo_sapiens 0 959
ENST00000467957 YBX1-003 processed_transcript Homo_sapiens 0 580
ENST00000489612 YBX1P2-001 processed_pseudogene Homo_sapiens 0 850
ENST00000509441 YBX1P5-001 processed_pseudogene Homo_sapiens 7e-39 165
ENST00000560358 RP11-244F12.1-001 processed_pseudogene Homo_sapiens 0 793
ENST00000605472 RP11-451F14.1-001 processed_pseudogene Homo_sapiens 5e-35 152
ENST00000616651 YBX1-201 protein_coding Homo_sapiens 0 1478

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