ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129342 Khdrbs1-001 ENSMUSG00000028790 10090 - 4:129703164-129742297 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECENSMUST00000129342
Transcript ID Tie2+ EC
ENSMUST00000129342 9.714±1.57

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005070 IPI SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0007166 IDA cell surface receptor signaling pathway
GO:0008143 ISO poly(A) binding
GO:0008266 ISO poly(U) RNA binding
GO:0009967 IPI positive regulation of signal transduction
GO:0016020 ISS membrane
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045948 ISS positive regulation of translational initiation
GO:0046831 IDA regulation of RNA export from nucleus
GO:0046833 ISS positive regulation of RNA export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281156 KHDRBS2-001 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000307714 KHDRBS1-002 processed_transcript Homo_sapiens 0 1502
ENST00000327300 KHDRBS1-001 protein_coding Homo_sapiens 0 2060
ENST00000484270 KHDRBS1-005 processed_transcript Homo_sapiens 0 1797
ENST00000492989 KHDRBS1-003 protein_coding Homo_sapiens 0 963

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