ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132682 Setd3-002 ENSMUSG00000056770 10090 - 12:108107038-108179227 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000132682
Transcript ID C166 Tie2+ EC
ENSMUST00000132682 3.860±0.15 13.990±0.55

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0010452 IDA histone H3-K36 methylation
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046975 IDA histone methyltransferase activity (H3-K36 specific)
GO:0051149 IMP positive regulation of muscle cell differentiation
GO:0051568 IDA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329331 SETD3-003 protein_coding Homo_sapiens 0 451
ENST00000331768 SETD3-001 protein_coding Homo_sapiens 0 1074
ENST00000357563 SETD3-004 nonsense_mediated_decay Homo_sapiens 0 776
ENST00000436070 SETD3-002 protein_coding Homo_sapiens 0 451
ENST00000446066 SETD3-005 nonsense_mediated_decay Homo_sapiens 0 1845
ENST00000453764 SETD3-008 nonsense_mediated_decay Homo_sapiens 0 776
ENST00000453938 SETD3-007 processed_transcript Homo_sapiens 0 676
ENST00000489770 SETD3-006 retained_intron Homo_sapiens 0 497

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