ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136936 Sqstm1-005 ENSMUSG00000015837 10090 - 11:50200167-50202954 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECENSMUST00000136936
Transcript ID Tie2+ EC
ENSMUST00000136936 22.571±5.03

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000407 IDA pre-autophagosomal structure
GO:0003712 TAS transcription cofactor activity
GO:0005515 IPI protein binding
GO:0016235 IDA aggresome
GO:0042802 IDA identical protein binding
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360718 SQSTM1-002 protein_coding Homo_sapiens 0 254
ENST00000389805 SQSTM1-001 protein_coding Homo_sapiens 0 254
ENST00000510187 SQSTM1-013 protein_coding Homo_sapiens 8e-36 156
ENST00000522663 C5orf45-004 nonsense_mediated_decay Homo_sapiens 0 215

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