ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162244 Cpsf4-003 ENSMUSG00000029625 10090 + 5:145167254-145181753 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000162244
Transcript ID C166 Tie2+ EC
ENSMUST00000162244 6.768±1.34 2.772±0.12

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005847 IEA mRNA cleavage and polyadenylation specificity factor complex
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292476 CPSF4-003 protein_coding Homo_sapiens 0 821
ENST00000412686 CPSF4-010 protein_coding Homo_sapiens 0 534
ENST00000430038 CPSF4-005 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000436336 CPSF4-001 protein_coding Homo_sapiens 0 1103
ENST00000437572 ATP5J2-PTCD1-003 processed_transcript Homo_sapiens 7e-22 108
ENST00000440514 CPSF4-011 protein_coding Homo_sapiens 0 289
ENST00000441580 CPSF4-004 protein_coding Homo_sapiens 0 904
ENST00000451876 CPSF4-002 protein_coding Homo_sapiens 0 505
ENST00000452047 CPSF4-007 protein_coding Homo_sapiens 0 429
ENST00000465132 CPSF4-009 retained_intron Homo_sapiens 3e-33 147
ENST00000469897 CPSF4-012 retained_intron Homo_sapiens 0 261
ENST00000471455 CPSF4-008 processed_transcript Homo_sapiens 0 614
ENST00000482251 CPSF4-013 retained_intron Homo_sapiens 0 222
ENST00000484112 CPSF4-006 retained_intron Homo_sapiens 0 534

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