ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168195 Runx1-004 ENSMUSG00000022952 10090 - 16:92605398-92696125 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000168195
Transcript ID C166 Tie2+ EC mES
ENSMUST00000168195 2.648±0.87 0.090±0.05 2.799±2.27

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0001701 IMP in utero embryonic development
GO:0001889 IMP liver development
GO:0002318 IMP myeloid progenitor cell differentiation
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005604 IDA basement membrane
GO:0005634 IDA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007417 IMP central nervous system development
GO:0009966 IMP regulation of signal transduction
GO:0030182 IMP neuron differentiation
GO:0031069 IMP hair follicle morphogenesis
GO:0035162 IMP embryonic hemopoiesis
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048266 IMP behavioral response to pain
GO:0048666 IMP neuron development
GO:0060216 IMP definitive hemopoiesis
GO:0070491 IPI repressing transcription factor binding
GO:0071336 IMP regulation of hair follicle cell proliferation
GO:0071560 IDA cellular response to transforming growth factor beta stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130697 RUNX1 (1 of 2)-201 protein_coding Danio_rerio 0 267
ENST00000300305 RUNX1-002 protein_coding Homo_sapiens 0 1825
ENST00000308873 RUNX3-001 protein_coding Homo_sapiens 0 342
ENST00000338888 RUNX3-002 protein_coding Homo_sapiens 0 342
ENST00000344691 RUNX1-001 protein_coding Homo_sapiens 0 2030
ENST00000358356 RUNX1-005 protein_coding Homo_sapiens 0 1223
ENST00000399237 RUNX1-012 protein_coding Homo_sapiens 0 1016
ENST00000399240 RUNX1-009 protein_coding Homo_sapiens 0 835
ENST00000399916 RUNX3-201 protein_coding Homo_sapiens 0 342
ENST00000437180 RUNX1-201 protein_coding Homo_sapiens 0 1825
ENST00000455571 RUNX1-010 protein_coding Homo_sapiens 0 529
ENST00000469087 RUNX1-007 retained_intron Homo_sapiens 0 316
ENST00000475045 RUNX1-013 protein_coding Homo_sapiens 6e-17 94
ENST00000482318 RUNX1-003 nonsense_mediated_decay Homo_sapiens 0 1435

Loading