ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022952 Runx1 10090 - 16:92601466-92826149 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023673 Runx1-001 92601466-92826149 protein_coding
  ENSMUST00000113956 Runx1-003 92603656-92697328 protein_coding
  ENSMUST00000168195 Runx1-004 92605398-92696125 protein_coding
  ENSMUST00000186296 Runx1-002 92695592-92825778 protein_coding
  ENSMUST00000187242 Runx1-007 92686956-92695495 protein_coding
  ENSMUST00000189126 Runx1-005 92686989-92697325 retained_intron
  ENSMUST00000189679 Runx1-006 92815428-92826074 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000023673ENSMUST00000113956ENSMUST00000168195
Transcript ID C166 Tie2+ EC mES
ENSMUST00000023673 N/A 0.014±0.01 1.247±0.00
ENSMUST00000113956 1.461±0.43 0.053±0.03 N/A
ENSMUST00000168195 2.648±0.87 0.090±0.05 2.799±2.27

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008ON CIL_0008ON_0002 VISTA
CIL_0007SX CIL_0007SX_0002 VISTA
CIL_0008OM CIL_0008OM_0002 VISTA
CIL_0008ZS CIL_0008ZS_0002 VISTA
CIL_00094R CIL_00094R_0002 VISTA
CIL_00078F CIL_00078F_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000975 IEA regulatory region DNA binding
GO:0001501 IMP skeletal system development
GO:0001701 IMP in utero embryonic development
GO:0001889 IMP liver development
GO:0002318 IMP myeloid progenitor cell differentiation
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005604 IDA basement membrane
GO:0005634 IDA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007417 IMP central nervous system development
GO:0008134 IEA transcription factor binding
GO:0009966 IMP regulation of signal transduction
GO:0030099 IEA myeloid cell differentiation
GO:0030182 IMP neuron differentiation
GO:0030853 IEA negative regulation of granulocyte differentiation
GO:0030854 IEA positive regulation of granulocyte differentiation
GO:0031069 IMP hair follicle morphogenesis
GO:0035162 IMP embryonic hemopoiesis
GO:0042803 IEA protein homodimerization activity
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048266 IMP behavioral response to pain
GO:0048666 IMP neuron development
GO:0060216 IMP definitive hemopoiesis
GO:0070491 IPI repressing transcription factor binding
GO:0071336 IMP regulation of hair follicle cell proliferation
GO:0071560 IDA cellular response to transforming growth factor beta stimulus
GO:2000872 IEA positive regulation of progesterone secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087646 RUNX1 (1 of 2) protein_coding Danio_rerio
ENSG00000159216 RUNX1 runt-related transcription factor 1 protein_coding Homo_sapiens

Loading