ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: lysine (K)-specific demethylase 5B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000235790 KDM5B-002 ENSG00000117139 9606 - 1:202729905-202807299 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000235790
Transcript ID HAoEC HUVEC
ENST00000235790 4.826±3.26 3.375±1.56

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112198 Kdm5b-003 protein_coding Mus_musculus 0 4883
ENSMUST00000047714 Kdm5b-001 protein_coding Mus_musculus 0 4883
ENSMUST00000112197 Kdm5b-002 retained_intron Mus_musculus 0 1797
ENSMUST00000133725 Kdm5b-004 retained_intron Mus_musculus 0 612
ENSMUST00000082177 Kdm5c-004 protein_coding Mus_musculus 0 420
ENSMUST00000112588 Kdm5c-001 protein_coding Mus_musculus 0 420
ENSMUST00000112584 Kdm5c-002 protein_coding Mus_musculus 0 420
ENSMUST00000186128 Kdm5b-005 retained_intron Mus_musculus 0 226

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