Transcript ID | BECs | HAoEC | HHSEC | HMVEC-D | HUVEC |
---|---|---|---|---|---|
ENST00000270066 | 5.706±1.04 | 0.902±0.46 | 2.319±0.00 | 1.625±0.00 | 1.272±0.64 |
Transcript Info |
||||||
Description: | SMG9 nonsense mediated mRNA decay factor | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000270066 | SMG9-001 | ENSG00000105771 | 9606 | - | 19:43727992-43754990 | protein_coding |
Expression Patterns
|
Conserved Regions |
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Not located within a conserved region. |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000184 | IMP:IEA | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
GO:0005515 | IPI | protein binding |
GO:0005622 | IDA | intracellular |
GO:0005829 | TAS | cytosol |
GO:0010467 | TAS | gene expression |
GO:0016070 | TAS | RNA metabolic process |
GO:0016071 | TAS | mRNA metabolic process |
GO:0042802 | IPI | identical protein binding |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000002280 | Smg9-001 | protein_coding | Mus_musculus | 0 | 1940 |
ENSMUST00000146381 | Smg9-002 | retained_intron | Mus_musculus | 0 | 874 |
ENSMUST00000148288 | Smg9-005 | retained_intron | Mus_musculus | 0 | 736 |
ENSMUST00000108434 | Smg9-004 | protein_coding | Mus_musculus | 0 | 736 |
ENSMUST00000146686 | Smg9-006 | retained_intron | Mus_musculus | 0 | 619 |
ENSMUST00000139481 | Smg9-003 | retained_intron | Mus_musculus | 0 | 331 |
ENSMUST00000123188 | Smg9-007 | protein_coding | Mus_musculus | 0 | 318 |
ENSMUST00000157025 | Ctr9-003 | retained_intron | Mus_musculus | 0.000002 | 60 |
ENSMUST00000152019 | Ctr9-002 | retained_intron | Mus_musculus | 0.000002 | 60 |