ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: PBX/knotted 1 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000291547 PKNOX1-001 ENSG00000160199 9606 + 21:42974510-43033582 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000291547
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000291547 1.193±0.52 2.332±0.57 0.679±0.00 4.141±0.00 2.712±1.12

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0030097 IEA hemopoiesis
GO:0030217 IEA T cell differentiation
GO:0030218 IEA erythrocyte differentiation
GO:0043010 IEA camera-type eye development
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097352 Pknox1-001 protein_coding Mus_musculus 0 1775
ENSMUST00000176701 Pknox1-004 protein_coding Mus_musculus 0 1618
ENSMUST00000175806 Pknox1-003 protein_coding Mus_musculus 0 1618
ENSMUST00000176895 Pknox1-002 retained_intron Mus_musculus 0 455
ENSMUST00000176513 Pknox1-007 retained_intron Mus_musculus 0 311
ENSDART00000125032 pknox1.2-001 protein_coding Danio_rerio 0.00000000000003 86
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00009 55

Loading